PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000283975
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 1201aa    MW: 135889 Da    PI: 7.6803
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000283975genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.75.6e-208669921116
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78 
                    lp+G++F+P+d el+  +L++k+   +      +  +e+i++++    i++ +P++Lp + +++ ++++fF+k+ k+yatg+rk+r+         
  MDP0000283975 866 LPVGVKFDPSDGELL-VHLAAKCGVGNsqphllI--DEFIPTLEgdngICYDHPKNLPGA-TKDGSSIHFFHKTMKAYATGQRKRRKvdsqrsvaS 957
                    799************.678888765554566432..334554423345**********44.4567899******************8688887776 PP

            NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116
                    ++ +W++tgk+k++++  + + g kk++    g +++ 
  MDP0000283975 958 EDVRWHKTGKTKAIME--NGVXGWKKIMYHL-GAEEDE 992
                    6999***********9..6689****99776.444443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501819.815350IPR001810F-box domain
PfamPF006464.8E-6947IPR001810F-box domain
SuperFamilySSF813831.7E-11962IPR001810F-box domain
SMARTSM002561.9E-6949IPR001810F-box domain
Gene3DG3DSA:1.20.1280.503.6E-8945No hitNo description
TIGRFAMsTIGR016402.4E-1798363IPR017451F-box associated interaction domain
Gene3DG3DSA:3.30.200.203.6E-21454533No hitNo description
SuperFamilySSF561124.72E-62459694IPR011009Protein kinase-like domain
SMARTSM002206.4E-45468769IPR000719Protein kinase domain
PROSITE profilePS5001137.502468735IPR000719Protein kinase domain
PfamPF000698.1E-46473690IPR000719Protein kinase domain
PROSITE patternPS001070474495IPR017441Protein kinase, ATP binding site
CDDcd139993.95E-81474692No hitNo description
Gene3DG3DSA:1.10.510.101.4E-43534710No hitNo description
PROSITE patternPS001080588600IPR008271Serine/threonine-protein kinase, active site
SuperFamilySSF1019416.28E-228511005IPR003441NAC domain
PROSITE profilePS5100516.7348661024IPR003441NAC domain
PfamPF023655.7E-5867986IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1201 aa     Download sequence    Send to blast
MRAAKYKCIP SGVLADILFR LPVKSLKRFE CVCKSWYDLI KDPSFXIQHL HHSKXVNQHX  60
LLXKGIRNSH XSLLCXDEIS LLSRHRLXLP SVFSEILGPC NGIYCFIRLN VEFELDLIAL  120
ANVSLREFXV VPDLSISHPH SQSQSVKLCG FGFDRKTNDY KLVLILSYAD RATGXEFDCK  180
EVVYSLRSKS WRELDXTFPY AEVTHWLSPF CKISYWPFLL TSDSGTYVNG NSHWLVSDTT  240
HWLANDDIRY TIRYFDMVDE VFRRISLPKL PEFSSYGDMY VXINALYTDS LSVVVRPKSY  300
IPDKTCEVWI MHDYGDDESW TKLXTXGPXE GIARSLKLLG FWQKGEFLFE YDEEQVISYN  360
PNTQKITQKF RICGSLRAYT ESLVSIVGDQ RDDQNLLFDI VKEEIRXVGC RXLDXLSLLF  420
YLALDCHRKI NLQMQKFQRE KTMGSGNGVY SVGDFDLDAK WLIDPKQLFV GPRIGEGAHA  480
KVYEGKYKNQ NVAVKIVPRG ETPEEIAKRE ARFAREVAMM SKVXHKNLVK FIGACKEPVM  540
VIVTELLLGG TLRKYLFSMR PRCLDTHVAV GFALDIARAM ECLHSHGIIH RDLKPENLIL  600
TADHKTVKLA DFGLAREESL TEMMTAETGT YRWMAPELYS TVTLRHGEKK HYNHKVDAYS  660
FAIVLWELIH NKLPFEGMSN LQAAYAAAFK MLLHYLSTIS XPAPAIPQRM FKSENAVLPP  720
ESPGTSSLMA THNSGETXKT NTDMEDKTKA ARAGYCLVLA AQDNQSHQTG RRXAITGNCR  780
APTKARXDXF VLSEXQPRTQ FRQPPGPTEK ASRRAWLINS RGLASKVKNA ARSTACPIKE  840
CGANRECPNC HFVIDNSDVL SEWPGLPVGV KFDPSDGELL VHLAAKCGVG NSQPHLLIDE  900
FIPTLEGDNG ICYDHPKNLP GATKDGSSIH FFHKTMKAYA TGQRKRRKVD SQRSVASEDV  960
RWHKTGKTKA IMENGVXGWK KIMYHLGAEE DEREGEYVVS KIFYQQHKQS ERNDNNVVXE  1020
DNDVNALRTS PRTPVPNPPI PPRPGKSVCF EDVPDEAMLR SSVKPTWLAG ESQADDLHSL  1080
DETLLCKEIF GSAXNLISNT DFNNNTYEVN GNSSTSXGXX DLENIGLDSP PDFQLPVKLT  1140
MKELPGMTLN SQICAIVESI RMASFSACSS RATRQLQCFR IRMEFPLALC NFSEHMKCVG  1200
M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4fk3_A7e-334436801230Serine/threonine-protein kinase B-raf
4fk3_B7e-334436801230Serine/threonine-protein kinase B-raf
4r5y_A7e-334436801230Serine/threonine-protein kinase B-raf
4r5y_B7e-334436801230Serine/threonine-protein kinase B-raf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-69NAC domain containing protein 44